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Current Practices


Biological research is becoming increasingly data driven due to:

  • - increasing use of -omics technology
  • - integration of multimodal data
  • - increasingly complex experiments
  • - increasing volume of data

Current practices are centered around creating workflows and pipelines to process data for quality control and normalization, which are often not reproducible or transparent. Downstream analysis of processed data is then analyzed across multiple coding scripts and results are scattered across plots and tables that have no distinct order. Furthermore, most of this "behind the scenes" process is not published for other researchers to see or use. Instead results are typically condensed into a final journal article that is then published.



Why SHARE?


Scientific Hub for Accessible Research and Exploration (SHARE) creates a one-stop shop to access code, data, data analysis with interactive and downloadable plots and tables, as well as anything else a researcher wants to link to a research project, such as a Shiny app. SHARE makes it easy for researchers to adopt open science practices, guides them through the steps and brings the various repository sites for code and data, such as GitHub and Figshare "in-house", making it easier for researchers to set up and link individual open science practices into their data science workflow.


Example Output of SHARE

  1. Homepage
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  2. Interactive 3D plots
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  3. Interactive and Downloadable Tables
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  4. Shiny Apps for More Granular Investigation
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